Publicaciones Departamento de Bioquímica y Genómica Microbianas
Período 2018 - 2024
2024
Roldan, D. M. Amarelle, V. 2024. Identification of novel broad host-range promoter sequences functional in diverse Pseudomonadota by a promoter-trap approach. Brazilian Journal of Microbiology.
Malan, A. K., Marizcurrena, J. J., Oribe, M., Castro-Sowinski, S., Batista, S. B. 2024. XylR regulates genes at xyl cluster, involved in D-xylose catabolism in Herbaspirillum seropedicae Z69. Archives of Microbiology.
Giménez, M., Azziz, G., Batista, S. B., 2024. Identification of mobile resistome in soils exposed to different impacts in Fildes Peninsula, King George Island. Antarctic Science.
Datathon 2022 Consortium: Jurburg, S. D., Álvarez Blanco, M. J., Chatzinotas, A., Kazem, A., König-Ries, B., Babin, D., Smalla, K., Cerecetto, V., Fernandez-Gnecco, G., Covacevich, F., Viruel, E., Bernaschina, Y., Leoni, C., Garaycochea, S., Terra, J. A., Fresia, P., Figuerola, E. L. M., Wall, L. G., Covelli, J. M., Agnello, A. C., Nieto, E. E., Festa, S., Dominici, L. E., Allegrini, M., Zabaloy, M. C., Morales, M. E., Erijman, L., Coniglio, A., Cassán, F. D., Nievas, S., Roldán, D. M., Menes, R., Vaz Jauri, P., Silva Marrero, C., Montañez Massa, A., Morel Revetria, M. A., Fernández-Scavino, A., Pereira-Mora, L., Martínez, S., Frene, J. P., 2024. Datathons: fostering equitability in data reuse in ecology. Trends in Microbiology.
Scarlato, M., Rieppi, M., Alliaume, F., Illarze, G., Bajsa, N., Bertoni, P., Bianchi, F. J. J. A., Echeverriborda, G., Galván, G., García de Souza, M., Gilsanz, J. C., González Barrios, P., Dieste, J. P., Trasante, T., Rossing, W. A. H., Dogliotti, S. 2024. Towards the development of cover crop - reduced tillage systems without herbicides and synthetic fertilizers in onion cultivation: Promising but challenges remain. Soil and Tillage Research.
de la Sovera, V., Bovio-Winkler, P., Zinola, G., Etchebehere, C. 2024. Microbial community evolution in a lab-scale reactor operated to obtain biomass for biochemical methane potential assays. Applied Microbiology and Biotechnology.
Oliveira, G. H. D., Sánchez, F. E., Delgado Guevara, D. A., Fuentes, L., Bovio-Winkler, P., Etchebehere, C., Zaiat, M., Domingues Rodrigues, J. A. 2024. Multi-stage process for mixed microbial culture production of polyhydroxyalkanoates from sugarcane stillage: Assessment of external nutrient supplementation Biochemical Engineering Journal.
Fuess, L.T., Eng, F., Bovio-Winkler, P. Etchebehere, C., Zaiat, M., do Nascimento, C.A.O. 2024. Methanogenic consortia from thermophilic molasses-fed structured-bed reactors: microbial characterization and responses to varying food-to-microorganism ratios. Brazilian Journal of Chemical Engineering.
Fuess, L. T., , R. C. Rogeri, F. Eng, A. do Vale Borges, P. Bovio-Winkler, C. Etchebehere, M. Zaiat. 2024. Thermophilic fermentation of sugarcane vinasse: Process flexibility explained through characterizing microbial community and predicting metabolic functions. International Journal of Hydrogen Energy.
Bovio-Winkler, A. Cabezas, Etchebehere, C. 2024. Unveiling the hidden diversity and functional role of Chloroflexota in full-scale wastewater treatment plants through genome-centric analyses. ISME communication.
Szabo-Corbacho, M. A., Sharma, P., Míguez, D., de la Sovera, V., Brdjanovic, D., Etchebehere, C., García, H. A., & van Lier, J. B. 2024. Inhibitory effects of long chain fatty acids on anaerobic sludge treatment: Biomass adaptation and microbial community assessment. Environmental Technology & Innovation.
Ortega-Martínez, E., Toledo-Alarcón, J., Fernández, E., Etchebehere, C., Cardeña, R., Cabezas, A., Koók, L., Bakonyi, P., Magdalena, J. A., Trably, E., Bernet, N., Jeison, D. 2024. A review of autotrophic denitrification for groundwater remediation: A special focus on bioelectrochemical reactors. Journal of Environmental Chemical Engineering.
2023
Amarelle, V., Roldán, D. M., Fabiano, E., & Guazzaroni, M. E. (2023). A synthetic biology toolbox for Antarctic Pseudomonas sp. strains: towards a psychrophilic non-model chassis for function-driven metagenomics. ACS Synthetic Biology.
Costa, A., Panzera, M., Roldán, D. M., Viera, F., Fernández, S., Zabaleta, M., Amarelle, V., & Fabiano, E. (2023). Biodiversity of Bradyrhizobium strains that nodulate Lupinus species native to Uruguay. Environmental Sustainability, 6, 195–211.
Seppey, C. V. W., Cabrol, L., Thalasso, F., Gandois, L., Lavergne, C., Martinez-Cruz, K., Sepulveda-Jauregui, A., Aguilar-Muñoz, P., Astorga-España, M. S., Chamy, R., Dellagnezze, B., Etchebehere, C., Fochesatto, G. J., Gerardo-Nieto, O., Mansilla, A., Murray, A., Sweetlove, M., Tananaev, N., Teisserenc, R., Tveit, A. T., Van de Putte, A., Svenning, M. M., & Barret, M. (2023). Biogeography of microbial communities in high-latitude ecosystems: Contrasting drivers for methanogens, methanotrophs and global prokaryotes. Environmental Microbiology.
Montoya-Rosales, J. D. J., Ontiveros-Valencia, A., Esquivel-Hernández, D. A., Etchebehere, C., Celis, L. B., & Razo-Flores, E. (2023). Metatranscriptomic Analysis Reveals the Coexpression of Hydrogen-Producing and Homoacetogenesis Genes in Dark Fermentative Reactors Operated at High Substrate Loads. Environmental Science and Technology.
Bovio-Winkler, P., Guerrero, L. D., Erijman, L., Oyarzúa, P., Suárez-Ojeda, M. E., Cabezas, A., & Etchebehere, C. (2023). Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors. BMC Microbiology, 23(1), 45.
Contreras, J. A., Valenzuela, E. I., Bovio-Winkler, P., Etchebehere, C., Gabaldan, C., & Quijano, G. (2023). Anaerobic methane oxidation: High-rate performance of a continuous bioreactor using nitrate and nitrite as electron acceptors. Chemical Engineering Journal.
Archer, S. D. J., Lee, K. C., Caruso, T., Alcami, A., Araya J. G., Cary, S. C., Cowan, D., Etchebehere, C, … Warren-Rhodes, K. A., & Pointing, S. B. (2023). Contribution of soil bacteria to the atmosphere across biomes. Science of the Total Environment.
Dellagnezze, B. M., Bovio-Winkler, P., Lavergne, C., Menoni, D., Mosquillo, F., Cabrol, L., Barret, M., & Etchebehere, C. (2023). Acetoclastic archaea adaptation under increasing temperature in lake sediments and wetland soils from Alaska. Polar Biology, 46(4), 259–275.
Ziliani, A., Bovio-Winkler, P., Cabezas, A., Etchebehere, C., Hector A. Garcia, Carlos M. López-Vázquez, Damir Brdjanovic, Mark C. M. van Loosdrecht, Francisco J. Rubio-Rincón, & F. J. (2023). Putative metabolism of Ca. Accumulibacter via the utilization of glucose. Water Research, 229, 119446.
Cancela, F., Ramos, N., Smyth, D. S., Etchebehere, C., Mirazo, S., & Trujillo, M. (2023). Wastewater surveillance of SARS-CoV-2 genomic populations on a country-wide scale through targeted sequencing. PloS one, 18(4), e028448310.
Batista, L. P. P., Paulinetti, A. P., Junior, A. D. N. F., Etchebehere, C, … Lovato, G., & Rodrigues, J. A. D. (2023). Two-stage thermophilic anaerobic digestion of cheese whey: Process optimization, comparison with single-stage, and full-scale estimation. Chemical Engineering and Processing - Process Intensification, 183, 109260.
Ferrari, E., Taulé, C, Mareque, González, A., Dourron, J., & F. Battistoni. (2023). Unraveling the plant growth promotion potential of the bacterial endophytic microbiota associated with Canola (Brassica napus) plants. Environmental Sustainability.
Hernández, I., Taulé, C., Reneé Pérez-Pérez, R. Battistoni, F., Fabiano, E., Villanueva-Guerrero, A., Nápoles, M. C., & Herrera, H. (2023). Endophytic seed-associated bacteria as plant growth promoters of Cuban rice (Oryza sativa L.). Microorganisms, 11, 2327.
Hernández, I., Nápoles, M. C., Maqueira López, M. A., & Battistoni, F. (2023). Contribution to the knowledge of the Rhizobium-rice (Oryza sativa L.) interaction. Opportunities for crop biofertilization. Anales de la Academia de Ciencias de Cuba.
Battistoni, F., Scavino, A. F., Ferrando, L., Montañez A, Pezzani F, Taulé P, & Vaz-Jauri P. (2023). Endophytic and rhizospheric microbial communities associated with native and introduced cultivated plant species in Uruguay as sources for plant growth promotion bioinoculant development. Environmental Sustainability, 6, 135–147.
Fabiano, E., Platero, R., Irisarri, P., Azziz G, Morel M, & J. Monza. (2023). Rhizobia biodiversity in Uruguay: preservation and uses. Environmental Sustainability, 6, 109–119.
Giménez, M., Batista, S. B., Castro-Sowinski, S., & Morel, M. A. (2023). Bioassays and in silico prediction of ecotoxicity of the soil bacterium Delftia sp. JD2. Environmental Sustainability.
Azziz, G., Giménez, M., Carballo, C., Espino, N., Barlocco, N., & Batista, S. B. (2023). Characterization of the fecal microbiota of Pampa Rocha pigs breed, a genetic resource endemic to eastern Uruguay. Heliyon, 2023, v.:9, Issue 6, J6-e166.
Rodríguez-Esperón, C., Sandes, L., Eastman, I., Croci, C., Garabato, F., Ferreira, V., Baraibar, M., Portela, M., Durán, R., & Platero, R. (2023). Nodulation in the absence of nod genes induction: alternative mechanisms involved in the symbiotic interaction between Cupriavidus sp. UYMMa02A and Mimosa pudica. Environmental Sustainability, 6, 383–401.
Castillo Cornejo, D. J., Platero, R, & Barba-Ostria, C. (2023). Current landscape and future directions of synthetic biology in South America. Front. Bioeng. Biotechnol., 11:1069628.
Senatore, D., Queirolo, A., Monza, J., & Bajsa, N. (2023). Using sugar cane vinasse as a biofertilizer: effects on soil microbial community due to periodical application. Environmental Sustainability, 6, 173–182.
Bajsa, N., Fabiano, E., & Rivas-Franco, F. (2023). Biological control of phytopathogens and insect pests in agriculture: an overview of 25 years of research in Uruguay. Environmental Sustainability, 6, 121–133.
Riera, N., Davyt, D., Durán, R., Iraola, G., Lemanceau, P, & Bajsa, N. (2023). An antibiotic produced by Pseudomonas fluorescens CFBP2392 with antifungal activity against Rhizoctonia solani. Frontiers in Microbiology.
Vaz Jauri, P., de los Santos, C., Fernández, B., Sotelo, J., & Battistoni, F. (2023). Differential modulation of the bacterial endophytic microbiota of Festuca arundinaceae (tall fescue) cultivars by the plant-growth promoting strain Streptomyces albidoflavus UYFA156. Plant and Soil.
2022
Cabezas, A., Azziz, G., Bovio-Winkler, P., Fuentes, L., Braga, L., Wenzel, J., ... & Etchebehere, C. 2022. Ubiquity and Diversity of Cold Adapted Denitrifying Bacteria Isolated From Diverse Antarctic Ecosystems. Frontiers in Microbiology, 13.
Dueholm, M.K.D., Nierychlo, M., Andersen, K.S., Rudkjøbing, V., Knutsson, S., Arriaga, S., Bakke, R., Boon, N., Bux, F., Christensson, M., Chua, A.S.M., Curtis, T.P., Cytryn, E., Erijman, L., Etchebehere, C., Fatta-Kassinos, D., Frigon, D., Garcia-Chaves, M.C., Gu, A.Z., Horn, H., Jenkins, D., Kreuzinger, N., Kumari, S., Lanham, A., Law, Y., Leiknes, T.O., Morgenroth, E., Muszyński, A., Petrovski, S., Pijuan, M., Pillai, S.B., Reis, M.A.M., Rong, Q., Rossetti, S., Seviour, R., Tooker, N., Vainio, P., van Loosdrecht, M., Vikraman, R., Wanner, J., Weissbrodt, D., Wen, X., Zhang, T., Nielsen, P.H., Albertsen, M., Nielsen, P.H. 2022. .MiDAS 4: A global catalogue of full-length 16S rRNA gene sequences and taxonomy for studies of bacterial communities in wastewater treatment plants. Nature Communications, 13 (1), art. no. 1908. DOI: 10.1038/s41467-022-29438-7
Montoya-Rosales, J.D.J., Palomo-Briones, R., Celis, L.B., Etchebehere, C., Cházaro-Ruiz, L.F., Escobar-Barrios, V., Razo-Flores, E. 2022. Coping with mass transfer constraints in dark fermentation using a two-phase partitioning bioreactor.Chemical Engineering Journal, 445, art. no. 136749. DOI: 10.1016/j.cej.2022.136749.
Ferraz A.D.N., Etchebehere C., Perecin, D., Teixeira, S., Woods , J. 2022. Advancing anaerobic digestion of sugarcane vinasse: Current development, struggles and future trends on production and end-uses of biogas in Brazil. Renewable and Sustainable Energy Reviews 157:112045. DOI: 10.1016/j.rser.2021.112045
Piffer, M. A., Oliveira, C. A., Bovio-Winkler, P., Eng, F., Etchebehere, C., Zaiat, M., ... & Fuess, L. T. 2022. Sulfate-and pH-driven metabolic flexibility in sugarcane vinasse dark fermentation stimulates biohydrogen evolution, sulfidogenesis or homoacetogenesis. International Journal of Hydrogen Energy, 47(73), 31202-31222.
Eng, F., Fuess, L. T., Bovio-Winkler, P., Etchebehere, C., Sakamoto, I. K., & Zaiat, M. 2022. Optimization of volatile fatty acid production by sugarcane vinasse dark fermentation using a response surface methodology. Links between performance and microbial community composition. Sustainable Energy Technologies and Assessments, 53, 102764.
Couto, P. T., Eng, F., Bovio-Winkler, P., Cavalcante, W. A., Etchebehere, C., Fuentes, L., ... & Ribeiro, R. 2022. Modeling of hydrogen and organic acid production using different concentrations of sugarcane vinasse under thermophilic conditions and a link with microbial community 16S rRNA gene sequencing data. Journal of Cleaner Production, 370, 133437
Barret, M., Gandois, L., Thalasso, F., Martinez Cruz, K., Sepulveda Jauregui, A., Lavergne, C., Bovio-Winkler, P., Etchebehere, C... & Cabrol, L. 2022. A combined microbial and biogeochemical dataset from high-latitude ecosystems with respect to methane cycle. Scientific data, 9(1), 1-13.
Callejas, C., López, I., Bovio-Winkler, P., Etchebehere, C., Borzacconi, L. 2022. Temporal analysis of the microbiota involved in the anaerobic degradation of sugarcane vinasse in a full-scale methanogenic UASB reactor. Biomass Conversion and Biorefinery, 12 (9), pp. 3887-3897. DOI: 10.1007/s13399-021-01281-8
Riviezzi, B., Campmajó, G., Cagide, C., Carrera, E., Saurina, J., Castro-Sowinski, S., Olivaro, C., Nuñez, O., and Morel, M.A. 2022. Comparative metabolite analysis of Delftia-Bradyrhizobium co-inoculated soybean plants using UHPLC-HRMS-based metabolomic profiling. Symbiosis. 85(3)
Alem, D., Canclini, L., Castro-Sowinski, S., and Martínez-López, W. 2022. Chemosensitizer Effect of Violacein on Cisplatin-treated Bladder Cancer Cells. Clinical Complementary Medicine and Pharmacology 2. 100036
Acosta, S., Canclini, L., Marizcurrena, J.J., Castro-Sowinski, S., and Hernandez, P. 2022. Photo-repair effect of a bacterial Antarctic CPD-photolyase on UVC-induced DNA lesions in human keratinocytes. Environmental Toxicology and Pharmacology 96. 104001
Diego Roldán, Andrés Costa, Stanislava Kralova, Hans-Jurgen Bussem Vanesa Amarelle, Elena Fabiano and Rodolfo Javier Menes. 2022. Paenibacillus farraposensis sp. nov. isolated from a root nodule of Arachis villosa. International Journal of Systematic and Evolutionary Microbiology. 72:005294. DOI: 0.1099/ijsem.0.005294
Andrés Costa, Belén Corallo, Vanesa Amarelle, Silvina Stewart, Dinorah, Susana Tiscornia and Elena Fabiano. 2022. Paenibacillus sp. strain UY79, isolated from a root nodule of Arachis villosa, displays a broad spectrum of antifungal activity. Applied and Environmental Microbiology. 88 (2): e01645-21. DOI 10.1128/AEM.01645-21
Hernández I, Taulé C, Pérez-Pérez R, Battistoni F, Fabiano E, Rivero D and Nápoles MC. 2022. New bacteria genera associated to rice (Oryza sativa L.) in Cuba promote the crop growth. Revista Mesoamericana de Agronomía, 33 (2). doi:10.15517/am.v33i2.47223
Coimbra L, Malan K, Fagúndez A, Guigou M, Lareo C, Fernández B, Pratto M, Batista S. 2022. Fermentation of D-xylose to ethanol by Saccharomyces cerevisiae CAT-1 recombinant strains. BioEnergy Research. DOI: https://doi.org/10.1007/s12155-022-10514-1.
Artículos de divulgación científica
Andrés Costa y Diego Roldán. 2022. Una nueva especie de bacteria del área protegida Esteros de Farrapos nos permite soñar con un mundo con menos agroquímicos. Enlace
2021
Oyarzúa P., Bovio-Winkler, P., Etchebehere, C., Suárez-Ojeda, M.E. 2021. Microbial communities in an anammox reactor treating municipal wastewater at mainstream conditions: Practical implications of different molecular approaches. Journal of Environmental Chemical Engineering, 9, 6, DOI: 10.1016/j.jece.2021.106622.
Dellagnezze, B.M., Winkler, P.B., Lavergne, C., Menoni, D.A., Mosquillo, F., Cabrol, L., Barret, M. and Etchebehere, C. 2021. Temperature increase affects acetate-derived methane production in Alaskan lake sediments and wetland soils. bioRxiv.
Ferraz, A.D.N., Júnior, Fuentes, L., de la Sovera, V., Bovio-Winkler, P., Eng, F., García, M., Etchebehere, C. 2021. Potentialities of biotechnological recovery of hydrogen and short- and medium-chain organic acids from the co-fermentation of cheese whey and Yerba Mate (Ilex paraguariensis) waste. Industrial Crops and Products, 171, DOI: 10.1016/j.indcrop.2021.113897
Fuentes, L., Palomo-Briones, r., Montoya-Rosales, J., Braga, L., Castelló, E., Vesga, A., Tapia-Venegas, E., Razo-Flores, E., Ecthebehere, C. 2021. Knowing the enemy: homoacetogens in hydrogen production reactors., Knowing the enemy: homoacetogens in hydrogen production reactors. Applied Microbiology and Biotechnology DOI: 10.1007/s00253-021-11656-6
Fuess, L.T., Fuentes, L., Bovio-Winkler, P., Eng, F., Etchebehere, C., Zaiat, M. and do Nascimento, C.A.O. 2021. Biohydrogen-producing from bottom to top? Quali-quantitative characterization of thermophilic fermentative consortia reveals microbial roles in an upflow fixed-film reactor. Chemical Engineering Journal Advances, 7, p.100125
Erijman, L., Campanaro, S., Etchebehere, C., Varesche, M.B.A. 2021. Editorial: Meta-omic Approaches to the Complex Anaerobic Communities in Wastewater Treatment Plants and Digesters Frontiers in Microbiology, 12. art. no. 664716, DOI: 10.3389/fmicb.2021.664716
Lovato, G., Augusto, I.M.G., Ferraz Júnior, A.D.N., Albanez, R., Ratusznei, S.M., Etchebehere, C., Zaiat, M., Rodrigues, J.A.D. 2021. Reactor start-up strategy as key for high and stable hydrogen production from cheese whey thermophilic dark fermentation International. Journal of Hydrogen Energy, 46 (54), pp. 27364-27379 DOI: 10.1016/j.ijhydene.2021.06.010
Fuess, L.T., Fuentes, L., Bovio-Winkler, P., Eng, F., Etchebehere, C., Zaiat, M., Augusto Oller do Nascimento, C. 2021. Full details on continuous biohydrogen production from sugarcane molasses are unraveled: Performance optimization, self-regulation, metabolic correlations and quanti-qualitative biomass characterization. Chemical Engineering Journal, 414, art. no. 128934, DOI: 10.1016/j.cej.2021.128934
Vesga-Baron, A., Etchebehere, C., Schiappacasse, M.C., Chamy, R., Tapia-Venegas, E. 2021. Controlled oxidation-reduction potential on dark fermentative hydrogen production from glycerol: Impacts on metabolic pathways and microbial diversity of an acidogenic sludge. International Journal of Hydrogen Energy, 46 (7), pp. 5074-5084. DOI: 10.1016/j.ijhydene.2020.11.028
Bovio-Winkler, P., Cabezas, A., Etchebehere, C. 2021. Database Mining to Unravel the Ecology of the Phylum Chloroflexi in Methanogenic Full Scale Bioreactors (2021) Frontiers in Microbiology, 11, art. no. 603234, .DOI: 10.3389/fmicb.2020.603234
Toledo-Alarcón, J., Fuentes, L., Etchebehere, C., Bernet, N., Trably, E. 2021. Glucose electro-fermentation with mixed cultures: A key role of the Clostridiaceae family (2021) International Journal of Hydrogen Energy, 46 (2), pp. 1694-1704. DOI: 10.1016/j.ijhydene.2020.10.042.
Niz, M.Y.K., Fuentes, L., Etchebehere, C., Zaiat, M. 2021 Sugarcane vinasse extreme thermophilic digestion: a glimpse on biogas free management. Bioprocess and Biosystems Engineering, DOI: 10.1007/s00449-021-02517-7
Callejas, C., López, I., Bovio-Winkler, P., Etchebehere, C., Borzacconi, L. 2021. Temporal analysis of the microbiota involved in the anaerobic degradation of sugarcane vinasse in a full-scale methanogenic UASB reactor. Biomass Conversion and Biorefinery, . DOI: 10.1007/s13399-021-01281-8
Carrasco V, Amarelle V, Lagos-Moraga S, Quezada CP, Espinoza-González R, Faccio R, Fabiano E, Perez-Donoso JM. 2021. Production of cadmium sulfide quantum dots by the lithobiontic Antarctic strain Pedobacter sp. UYP1 19 and their application as photosensitizer in solar cells. Microbial Cell Factory. / 20:41. DOI: https://doi.org/10.1186/s12934-021-01531-4
Costa A, Corallo B, Amarelle V, Stewart S, Pan D, Tiscornia S, Fabiano E. 2021. Paenibacillus sp. strain UY79, isolated from a root nodule of Arachis villosa, displays a broad spectrum of antifungal activity. Applied and Environmental Microbiology.
Heijo, G., Taulé, C., Mareque, C., Steffanelo, A., De Souza, E., F. Battistoni. 2021. Interaction among endophytic bacteria, sweet sorghum (Sorghum bicolor) cultivars and chemical nitrogen fertilization. FEMS Microbiology Ecology. https://doi.org/10.1093/femsec/fiaa245
Cecilia Taulé-Patricia Vaz, Federico Battistoni. 2021. Insights into the early stages of plant-endophytic bacteria interaction. World Journal of Microbiology and Biotechnology. DOI: 10.1007/s11274-020-02966-4.
Hernández, I., Taulé, C., Pérez-Pérez, R., Battistoni, F., Fabiano, E., Rivero, D., María Caridad Nápoles. 2021. Endophytic rhizobia promote the growth of Cuban rice cultivar. Symbiosis. https://doi.org/10.1007/s13199-021-00803-2
Hernández, I., Pérez-Pérez, R., , Taulé, C., Fabiano, E., Battistoni, F., María Caridad Nápoles. 2021. “New bacteria genera associated to rice (Oryza sativa L.) in Cuba promote the crop growth”. Agronomía Mesoamericana. Aceptado.
Iribarnegaray, V., González, MJ., Caetano, AL., Platero, R., Zunino, P., Scavone P. 2021. Relevance of iron metabolic genes in biofilm and infection in uropathogenic Proteus mirabilis. Current Research in Microbial Sciences. https://doi.org/10.1016/j.crmicr.2021.100060
Arce‐Rodríguez, A., Nikel, P. I., Calles, B., Chavarría, M., Platero, R., Krell, T., & de Lorenzo, V. 2021. Low CyaA expression and anti‐cooperative binding of cAMP to CRP frames the scope of the cognate regulon of Pseudomonas putida. Environmental Microbiology, 23(3), 1732-1749. https://doi.org/10.1111/1462-2920.15422.
Rodríguez-Esperón, M.C., Eastman, G., Sandes, L., Garabato, F., Eastman, I., Iriarte, A., Fabiano, E., Sotelo-Silveira, J.R. and Platero, R. 2021. Genomics and transcriptomics insights into luteolin effects on the beta-rhizobial strain Cupriavidus necator UYPR2.512. Environ Microbiol. https://doi.org/10.1111/1462-2920.15845
Antelo V, Giménez M, Azziz G, Valdespino-Castillo P, Falcón LI, Ruperto L, Mac Cormack W, Mazel D, Batista SB. 2021. Metagenomic strategies identify diverse integron-integrase and antibiotic resistance genes in the Antarctic environment. MicrobiologyOpen, p.:1-14 DOI: https://doi.org/10.1002/mbo3.1219.
Malan AK, Tuleski T, Catalán AI, De Souza E, Batista SB. 2021. Herbaspirillum seropedicae expresses non phosphorylative pathways for D-xylose catabolism. Applied Microbiology and Biotechnology, v.:105, p.:7339–7352 DOI: https://doi.org/10.1007/s00253-021-11507-4.
Riviezzi B, Campmajó G, Cagide C, Carrera E, Saurina J, Castro-Sowinski S, Olivaro C, Nuñez O, Morel MA. 2021. Comparative metabolite analysis of Delftia-Bradyrhizobium co-inoculated soybean plants using UHPLC-HRMS-based metabolomic profiling. Symbiosis DOI:10.1007/s13199-021-00818-9.
Riviezzi B, García-Laviña CX, Morel MA, Castro-Sowinski S. 2021. Facing the communication between soybean plants and microorganisms (Bradyrhizobium and Delftia) by quantitative shotgun proteomics. Symbiosis / 83: 293-304 / DOI: 10.1007/s13199-021-00758-4.
Valdespino PM, Merino M, Valdespino VM, Batista SB. 2021. De biofilms y otras películas. Revista Digital Universitaria (RDU-UNAM). Vol 20, N°5; 2019. http://doi.org/10.22201/codeic.16076079e.2019.v20n5.a1
Arredondo D, Giachetto G, González MJ, González Perilli F, Inthamoussu M, Morel M, Pardo L, Robino L, Speranza N, Zunino C. 2021. Vacilación frente a las vacunas: derribando mitos. Artículo de divulgación creado en el marco de CSIC, Fondo Universitario para contribuir a la comprensión pública de temas de interés general (2019)
Peruzzo N, Rodriguez Juele A. 2021. Vacunas. Mitos y realidades. / Ed. Bandas Educativas. Librillo en formato de historieta, financiado por el Fondo Universitario para contribuir a la comprensión pública de temas de interés general (2019), de CSIC-Udelar.
Alcántara-Hernández R, Falcón LI, Tas N, Valdespino-Castillo P, Merino-Ibarra M, Campo JE, Batista SB. 2021. Book: "Unique Ecosystems: amazing microbes" Capítulo: "Antarctic Bacteria in Microbial Mats from King George Island, Maritime Antarctica" Organizadores: Anita Pandey, Avinash Sharma. Editorial CRC Press. ISBN 9780367350161.
2019
Vaz Jauri, P., Martín Beracochea, Belén Fernández and F. Battistoni. 2019 Whole-Genome Sequencing of Streptomyces sp. Strain UYFA156, a Cultivar-Specific Plant Growth-Promoting Endophyte of Festuca arundinacea. Microbiology Resource Announcements, (https://doi.org/10.1128/MRA.00722-19) .
Vaz Jauri, P., C. Taulé, MC. de los Santos, B. Fernandez and F. Battistoni. 2019 Interactions between putatively endophytic bacteria and tall fescue (Festuca arundinacea): plant growth promotion and colonization in host and non-host cultivars. Plant and Soil (https://doi.org/10.1007/s11104-019-04359-5).
Beracochea, M., Taulé, C. and F. Battistoni. 2019. Draft Genome Sequence of Kosakonia radicincitans UYSO10, an endophytic plant growth-promoting bacterium of sugarcane (Saccharum officinarum). Microbiology Resource Announcements https://doi.org/10.1128/MRA.01000-19.
Bovio P, Cabezas A, Etchebehere C. (en prensa). Preliminary analysis of Chloroflexi populations in full scale UASB methanogenic reactors. Journal of Applied Microbiology. doi:1o.1111/jam.15115.
Cabezas A, Bovio P, Etchebehere C. 2019. Commercial formulation amendment transiently affects the microbial composition but not the biogas production of a full scale methanogenic UASB reactor. Environmental Technology. doi:10.1080/09593330.2019.1600042.
Morel M, Peruzzo N, Rodriguez Juele A, Amarelle V. 2019. Comics as an educational resource to teach microbiology in the classroom. J Microbiol Biol Educ 20:1-4.
Ribeiro LF, Amarelle V, Ribeiro LFC, Guazzaroni M-E. 2019. Converting a Periplasmic Binding Protein into a Synthetic Biosensing Switch through Domain Insertion. Biomed Res Int 2019:1–15.
Amarelle V, Koziol U, Fabiano E. 2019. Highly conserved nucleotide motifs present in the 5′UTR of the heme-receptor gene shmR are required for HmuP-dependent expression of shmR in Ensifer meliloti. BioMetals 32:273–291.
Amarelle V, Sanches-Medeiros A, Silva-Rocha R, Guazzaroni ME. 2019. Expanding the Toolbox of Broad Host-Range Transcriptional Terminators for Proteobacteria through Metagenomics. ACS Synth Biol 8:647–654.
Marizcurrena JJ, Martínez-López W, Ma H, Lamparter T, Castro-Sowinski S. 2019. A highly efficient and cost-effective recombinant production of a bacterial photolyase from the Antarctic isolate Hymenobacter sp. UV11. Extremophiles, 23(1), 49-57.
Marizcurrena JJ, Morales D, Smircich P, Castro-Sowinski S. 2019. Draft Genome Sequence of the UV-Resistant Antarctic Bacterium Sphingomonas sp. Strain UV9. Microbiol Resour Announc, 8(7), e01651-18.
Herrera LM, Braña V, Franco Fraguas L, Castro-Sowinski S. 2019. Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42. Microbiological Research. 223-225, 13-21
Azziz G, Giménez M, Romero H, Valdespino-Castillo PM, Falcón LI, Ruberto L, Mac Cormack W, Batista S. 2019. Diversity of Beta-lactamase genes in microbial mats from distinct sites of the Antarctic continent. Frontiers of Environmental Science & Engineering. 13(3):44, 2019. doi.org/10.1007/s11783-019-1128-1
Taulé C, Luizzi H, Beracochea M, Mareque C, Platero R, Battistoni F. 2019. The Mo- and Fe- nitrogenases of the endophyte Kosakonia sp. UYSO10 are necessary for growth promotion of sugarcane. Annals of Microbiology. doi.org/10.1007/s13213-019-01466-7.
Langleib M, Beracochea M, Zabaleta M, Battistoni F, Sotelo-Silveira J, Fabiano E, Iriarte A, Platero P. 2019. Draft Genome Sequence of Paraburkholderia sp. UYCP14C, a Rhizobium Strain Isolated from Root Nodules of Calliandra parvifolia. Microbiology Resource Announcements, 1 , doi: 10.1128/MRA.00173-19
Capítulos de libros
Amarelle V, Carrasco V, Fabiano E. 2019. The Hidden Life of Antarctic Rocks, p. 221–237. In Castro-Sowinski, S (ed.), The Ecological Role of Micro-organisms in the Antarctic Environment. Springer Polas Sciences. Springer International Publishing.
Giménez M, Azziz G, Gill PR, Batista S. 2019. Horizontal Gene Transfer Elements: Plasmids in Antarctic Microorganisms, p. 85–107. In Castro-Sowinski, S (ed.), The Ecological Role of Micro-organisms in the Antarctic Environment. Springer Polas Sciences. Springer International Publishing.
2018
Trovero MF, Scavone P, Platero R, Souza EM, Fabiano E, Rosconi F. 2018. Herbaspirillum seropedicae differentially expressed genes in response to iron availability. Frontiers in microbiology. 9:1430. doi: 10.3389/fmicb.2018.01430
Mareque C, Freitas da Silva T, Estebanez Vollú R, Beracochea M, Seldin L, Battistoni F. 2018. The Endophytic Bacterial Microbiota Associated with Sweet Sorghum (Sorghum bicolor) Is Modulated by the Application of Chemical N Fertilizer to the Field. International Journal of Genomics doi.org/10.1155/2018/7403670
Cagide C, Riviezzi B, Minteguiaga M, Morel MA, Castro-Sowinski S. 2018. Identification of plant compounds involved in the microbe-plant communication during the co-inoculation of soybean with Bradyrhizobium elkanii and Delftia sp. JD2. Molecular Plant-Microbe Interactions. doi: 10.1094/MPMI-04-18-0080-CR
Jara E, Morel MA, Lamolle G, Castro-Sowinski S, Simón D, Iriarte A, Musto H. 2018. The complex pattern of codon usage evolution in the family Comamonadaceae. Ecological Genetics and Genomics 6:1-8.
Catalán AI, Malan AK, Ferreira F, Gill PR, Batista SB. 2018. Propionic acid metabolism and poly-3-hydroxybutyrate-co-3-hydroxyvalerate production by a prpC mutant of Herbaspirillum seropedicae Z69. Journal of Biotechnology. 286:36-44.
Valdespino-Castillo PM, Cerqueda-García D, Cecilia Espinosa A, Alcántara-Hernández RJ, Batista S, Merino-Ibarra M, Tas N¸ Falcón LI. 2018. Microbial distribution and turnover in Antarctic microbial mats highlight the relevance of heterotrophic bacteria in low-nutrient environments. FEMS Microbiology Ecology. 94:9. doi: 10.1093/femsec/fiy129
Callejas C, Azziz G, Souza EM, Gill PR, Batista SB. 2018. Prokaryotic diversity in four microbial mats on the Fildes Peninsula, King George Island, maritime Antarctica. Polar Biology. 41(5): 935-943.
Antelo V, Guerot AM, Mazel D, Batista SB. 2018. Class 1 integrons in conjugative plasmids of drug-resistant bacteria from Fildes Peninsula of King George Island (maritime Antarctica). Antarctic Science. 30:22-28.
Marizcurrena JJ, Martínez-López W, Ma H, Lamparter T, Castro-Sowinski S. 2018. A highly efficient and cost-effective recombinant production of a bacterial photolyase from the Antarctic isolate Hymenobacter sp. UV11. Extremophiles. doi:10.1007/s00792-018-1059-y
Pavan ME, Pavan EE, Glaeser SP, Etchebehere C, Kämpfer P, Pettinari MJ, Lopez NI. 2018 Proposal for a new classification of a deep branching bacterial phylogenetic lineage: transfer of Coprothermobacter proteolyticus and Coprothermobacter platensis to Coprothermobacteraceae fam. nov., within Coprothermobacterales ord. nov., Coprothermobacteria classis nov. and Coprothermobac-terota phyl. nov. International Journal of Systematic and Evolutionary Microbiology. 68:1627-1632. doi:10.1099/ijsem.0.002720.
Franchi O, Bovio P, Ortega-Martínez E, Rosenkranz F, Chamy R. 2018. Active and total microbial community dynamics and the role of functional genes bamA and mcrA during anaerobic digestion of phenol and p-cresol. Bioresource Technology. doi: 10.1016/j.biortech.2018.05.060
Fuentes L, Braga L, Castelló E, Etchebehere C. 2018. Work scheme to isolate the different micro-organisms found in hydrogen producing reactors. Journal of Applied Microbiology. 125(1):96-110. doi: 10.1111/jam.13763
Wenzel J, Fiset E, Batlle-Vilanova P, Cabezas A, Etchebehere C, Balaguer DM, Colprim J, Puig S. 2018. Microbial community pathways for the production of volatile fatty acids from CO2 and electricity. Frontiers in Energy Research. 6:15. doi: 10.3389/fenrg.2018.00015
Castelló E, Braga L, Fuentes L, Etchebehere C. 2018 Possible causes for the instability in the H2 production from cheese whey in a CSTR. International Journal of Hydrogen Energy. 43:2654-2665.
Editor(es) de libro
Genomic and Postgenomic Approaches to Understand Environmental Microorganisms. Editor principal: Rafael Silva-Rocha. Editores invitados: María Eugenia Guazzaroni y Raúl A. Platero. International Journal of Genomics. 2018. 5 artículos científicos (se publicarán más en esta edición especial), 64 páginas. doi:10.1155/4140